All Methods Instance Methods Concrete Methods
Modifier and Type |
Method and Description |
void |
addFilter(String filter) |
void |
addFilters(Collection<String> filters) |
void |
clearAttributes() |
boolean |
filtersWereApplied() |
Object |
getAttribute(String key) |
Object |
getAttribute(String key,
Object defaultValue) |
boolean |
getAttributeAsBoolean(String key,
boolean defaultValue) |
double |
getAttributeAsDouble(String key,
double defaultValue) |
List<Double> |
getAttributeAsDoubleList(String key,
Double defaultValue) |
int |
getAttributeAsInt(String key,
int defaultValue) |
List<Integer> |
getAttributeAsIntList(String key,
Integer defaultValue) |
List<Object> |
getAttributeAsList(String key)
Gets the attributes from a key as a list.
|
String |
getAttributeAsString(String key,
String defaultValue) |
List<String> |
getAttributeAsStringList(String key,
String defaultValue) |
Map<String,Object> |
getAttributes() |
Set<String> |
getFilters() |
Set<String> |
getFiltersMaybeNull() |
double |
getLog10PError() |
String |
getName() |
int |
getNumAttributes() |
double |
getPhredScaledQual()
Floating-point arithmetic allows signed zeros such as +0.0 and -0.0.
|
boolean |
hasAttribute(String key) |
boolean |
hasLog10PError() |
boolean |
isFiltered() |
boolean |
isNotFiltered() |
void |
putAttribute(String key,
Object value) |
void |
putAttribute(String key,
Object value,
boolean allowOverwrites) |
void |
putAttributes(Map<String,?> map) |
void |
removeAttribute(String key) |
void |
setAttributes(Map<String,?> map) |
void |
setLog10PError(double log10PError) |
void |
setName(String name)
Sets the name
|