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Packages that use jebl.evolution.io | |
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jebl.evolution.align | Provides classes and interfaces for pairwise alignment of two sequences. |
jebl.evolution.io | |
jebl.evolution.trees |
Classes in jebl.evolution.io used by jebl.evolution.align | |
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ImportException
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Classes in jebl.evolution.io used by jebl.evolution.io | |
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AlignmentExporter
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AlignmentImporter
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ByteBuilder
Similar to a StringBuilder, but its internal buffer is a byte[] with one entry for each character, so it can only correctly append single-byte characters. |
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DistanceMatrixImporter
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DistanceMatrixImporter.Triangle
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IllegalCharacterPolicy
What to do when an imported document contains illegal characters |
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ImmediateSequenceImporter
A sequence importer sending the sequences back one by one, which makes it possible to import larger documents if handled wisely on the other side. |
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ImmediateSequenceImporter.Callback
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ImportException
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NexusImporter.NexusBlock
Represents the block types used in the nexus format |
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SequenceExporter
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SequenceImporter
Interface for importers that do sequences |
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TreeExporter
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TreeImporter
Interface for importers that do trees |
Classes in jebl.evolution.io used by jebl.evolution.trees | |
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ImportException
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NexusImporter
Class for importing NEXUS file format. |
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