jebl.evolution.align.scores
Interfaces 
ScoreMatrix
Classes 
AminoAcidScores
Blosum45
Blosum50
Blosum55
Blosum60
Blosum62
Blosum65
Blosum70
Blosum75
Blosum80
Blosum85
Blosum90
Hamming
JukesCantor
NucleotideScores
Pam100
Pam110
Pam120
Pam130
Pam140
Pam150
Pam160
Pam170
Pam180
Pam190
Pam200
Pam210
Pam220
Pam230
Pam240
Pam250
Scores
ScoresFactory
SubstScoreMatrix