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java.lang.Objectjebl.evolution.trees.ClusteringTreeBuilder<Tree>
jebl.evolution.trees.NeighborJoiningTreeBuilder
public class NeighborJoiningTreeBuilder
Constructs an unrooted tree by neighbor-joining using pairwise distances. Adapted from BEAST code.
Constructor Summary | |
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NeighborJoiningTreeBuilder(DistanceMatrix distanceMatrix)
construct NJ tree |
Method Summary |
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Methods inherited from class jebl.evolution.trees.ClusteringTreeBuilder |
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addProgressListener, build, fireSetProgress, getBuilder, removeProgressListener |
Methods inherited from class java.lang.Object |
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equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public NeighborJoiningTreeBuilder(DistanceMatrix distanceMatrix)
distanceMatrix
- distance matrix
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