jebl.evolution.treemetrics
Class RobinsonsFouldMetric

java.lang.Object
  extended by jebl.evolution.treemetrics.RobinsonsFouldMetric
All Implemented Interfaces:
RootedTreeMetric

public class RobinsonsFouldMetric
extends java.lang.Object
implements RootedTreeMetric

Version:
$Id$
Author:
Andrew Rambaut

Constructor Summary
RobinsonsFouldMetric()
           
RobinsonsFouldMetric(java.util.List<Taxon> taxa)
           
 
Method Summary
 double getMetric(RootedTree tree1, RootedTree tree2)
          calculates the metric between two rooted trees
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

RobinsonsFouldMetric

public RobinsonsFouldMetric()

RobinsonsFouldMetric

public RobinsonsFouldMetric(java.util.List<Taxon> taxa)
Method Detail

getMetric

public double getMetric(RootedTree tree1,
                        RootedTree tree2)
Description copied from interface: RootedTreeMetric
calculates the metric between two rooted trees

Specified by:
getMetric in interface RootedTreeMetric
Parameters:
tree1 - first tree
tree2 - second tree
Returns:
the tree metric value


http://code.google.com/p/jebl2/